CDS

Accession Number TCMCG017C20646
gbkey CDS
Protein Id OMO82631.1
Location complement(join(22518..22617,22754..22839,22930..22977,23218..23334,23417..23482,23785..23868,24103..24186,25675..25785,25879..25936,26039..26094,26842..26978,27663..27930))
GeneID InterPro:IPR006171
Organism Corchorus olitorius
locus_tag COLO4_22895

Protein

Length 404aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01018097.1
Definition hypothetical protein COLO4_22895 [Corchorus olitorius]
Locus_tag COLO4_22895

EGGNOG-MAPPER Annotation

COG_category L
Description Twinkle homolog protein chloroplastic
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K17680        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003896        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006260        [VIEW IN EMBL-EBI]
GO:0006261        [VIEW IN EMBL-EBI]
GO:0006269        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009165        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009260        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046390        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901293        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTTGCGCCTTCCTTATCATATCCGTCACAATCCTCACTTCCGTCGCCTCAAACACTCGTTCCTTTCCTCAAACAGTGCAGTTCTCCTGGCCTCCAAAACCTTCTCTTCTTCTTTCTTCAGAACCCTGCTGCCTTCAACCCCTTCTCCTAAGCCCTGTAAACGCCTTGTTCCTTCTCTTTCTTCAAAACCCATCTCCAAAAACAACTCTTTGAAGCTTCCTACTAATGGGTTTTCTTTTCTTCCTTATGCCAGTGTCACTACTCCAGTTTATCCTAAGGACTTGGAAGAACGCCACCTGGATACGCCTAGCTGGAAAATTTTGAATAAGAGACTGACGGATCTTGGCATAAATACAAGTGAAGAATGTGTTCCTGGGGTGGAAAATCGCTTACTTTGCCCCTCGTGCAACGGTGGTGAGTCAGAGGAAATTAGCTTATCTCTTTTCATTGAAGAAGATTGGAGTTCTGCTAAATGGTTGTGTTTTCGAGCAAAATGTGGGTGGAAAGGCGCCACAAAGGCTTTAGCTGATGGCAAGCCATCTGATCAAAGTTTCAACAAAGTTAACAAATACAAGGCCCCCAGGCAAATCACCGTGGAGGGTTTGCTATTAGAACCACTTTCTATTGAGGTCATTGCTTATTTCGCAGAGCGAATGATATCTGCAGAAACTCTAAAGAGAAATGCTGTTATGCAAAAAAGGTTGGGTGAACAGATTAATATTGCATTCACTTATTGGCGTAAAGGAGCCCTTGTACATTGCAAATATCGGGGTATAGAAAAAAAGAAATTTTCTCAGGAGAAGGATACTGAAAAGATATTTTATGGGCTGGATGATATAGAGGATGAAAGCGATATCATCATTGTTGAAGGTGAAATGGACAAGCTTGCAATGGAGGAAGCTGGCTTCCGAAATTGTGTCAGTGTCCCTGATGGTGCTCCACAATCAGTTTCCTCAAAAGGGGTTCCAGATGAAGAGAAGGACACGCAGTTTCGATATCTGTGGAAGTGCAAAGAGTACATAGCAAAGGCATCACGCATTATACTTGCCACTGATGGGGATATCCCCGGTCAAGCCTTAGCTGAAGAGCTTGCACGTCGCATTGGAAGAGAAAGGTGCTGGAGAGTTAAATGGCCTAAGAAAAATGATACTGCTGATTTCAAAGATGCAAATGAGGTAATAGAGCTAGCTATATCTTTGTCTCTATGCCTGTAA
Protein:  
MLRLPYHIRHNPHFRRLKHSFLSSNSAVLLASKTFSSSFFRTLLPSTPSPKPCKRLVPSLSSKPISKNNSLKLPTNGFSFLPYASVTTPVYPKDLEERHLDTPSWKILNKRLTDLGINTSEECVPGVENRLLCPSCNGGESEEISLSLFIEEDWSSAKWLCFRAKCGWKGATKALADGKPSDQSFNKVNKYKAPRQITVEGLLLEPLSIEVIAYFAERMISAETLKRNAVMQKRLGEQINIAFTYWRKGALVHCKYRGIEKKKFSQEKDTEKIFYGLDDIEDESDIIIVEGEMDKLAMEEAGFRNCVSVPDGAPQSVSSKGVPDEEKDTQFRYLWKCKEYIAKASRIILATDGDIPGQALAEELARRIGRERCWRVKWPKKNDTADFKDANEVIELAISLSLCL